Protein Alignment Pph13 and Shox2

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_037160.2
• Gene: Shox2 / 25546
• RGDID: 3674
• Length: 331
• Species: Rattus norvegicus
• Alignment Length: 182
• Identity: 68/182 - (37%)
• Similarity: 85/182 - (46%)
• Gaps: 43/182 - (23%)

  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |:|..|.||||.||.|...||.||||.|..|||||.|.||||:.|:.|:||||||||||||||.|
  Rat   132 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 196

  Fly    67 KQEK------IGGLGGDYKE---------GALDL-----------DVSYDDSAVLGQLDSALGGG 105
            |||.      :.|....::.         |||.:           .:|:...|.| |||||:...
  Rat   197 KQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPLSFQVQAQL-QLDSAVAHA 260

  Fly   106 G-------------TLLPDTP---PQSSNSLDNELKASYGTGAMSPSRLSPN 141
            .             .:.|..|   |.::.:.|:...||....|.:....|.|
  Rat   261 HHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKN 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	38/55 (69%)
Shox2	NP_037160.2	Homeodomain	141..197	CDD:459649	38/55 (69%)
		OAR	311..327	CDD:461067	1/2 (50%)