DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and ceh-8

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_492246.2 Gene:ceh-8 / 191617 WormBaseID:WBGene00000433 Length:276 Species:Caenorhabditis elegans


Alignment Length:244 Identity:81/244 - (33%)
Similarity:107/244 - (43%) Gaps:62/244 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            :||||.||||.|.||..||.||.:||||||:.||.||.::.|.|.||||||||||||:|:||| .
 Worm    58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQEK-Q 121

  Fly    73 GLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQ----------SSNSLDNEL--- 124
            ...|:.|....|...|:          |.:....|   ||||.          .:|.:.:|.   
 Worm   122 DCQGEEKHSLKDTMPSW----------SWMSENKT---DTPPMLPPANTLSSTHNNGISDEFFKT 173

  Fly   125 ----------KASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQM 179
                      .|.|||.|.     :.::....|:.||..| .....||:..:  |||.:.:.|.:
 Worm   174 SEGKEVYGFPFAEYGTPAD-----NTHVSKTGNVFHLNFE-DSDKKSMKKES--PQTPSTSSPFI 230

  Fly   180 DSDNQLQQHP-------PQQHASD-----PIHAGSSSHHQQQQQQHQQE 216
            .     :.||       |.|..|:     |:......|.:..|..|.||
 Worm   231 S-----EYHPPFIPYYIPNQSFSNAFNQYPMPFPYPIHFEPPQLTHSQE 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 37/55 (67%)
ceh-8NP_492246.2 Homeodomain 61..117 CDD:459649 37/55 (67%)

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