DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Pax7

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus


Alignment Length:331 Identity:103/331 - (31%)
Similarity:139/331 - (41%) Gaps:80/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKGT---------MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQV 56
            :|:|:         :||||||.||||...||:|||:||:||||||::.|||||.|..||||||||
Mouse   199 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQV 263

  Fly    57 WFQNRRAKWRKQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGG--GTLLPDTPP---QS 116
            ||.||||:||||           .||..|       |....|   |.||  .|.:|..||   ..
Mouse   264 WFSNRRARWRKQ-----------AGANQL-------AAFNHL---LPGGFPPTGMPTLPPYQLPD 307

  Fly   117 SNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDS 181
            |......:....|:....|..|.|:..      |.|.....:..:...|.|..:....::    |
Mouse   308 STYPTTTISQDGGSTVHRPQPLPPSTM------HQGGLAAAAAAADTSSAYGARHSFSSY----S 362

  Fly   182 DNQLQQHPPQQHASDPIHAGSS-------SHHQQQQQQHQQEQHNPQLHPGLEFAASLSL----- 234
            |:.:....|..| .:|:..|.|       |:......|.|.:.....||.||:.|:|:|.     
Mouse   363 DSFMNPGAPSNH-MNPVSNGLSPQVMSILSNPSAVPPQPQADFSISPLHGGLDSASSISASCSQR 426

  Fly   235 -------DMTDGSSAYDEMKF----LSVD---------VDQFTIDSFKADCILSMEQSQMQAYGG 279
                   |....|.:|....:    .|||         ..|..:|....:..|| .|.:|: .|.
Mouse   427 ADSIKPGDSLPTSQSYCPPTYSTTGYSVDPVAGYQYSQYGQTAVDYLAKNVSLS-TQRRMK-LGE 489

  Fly   280 HSQLVG 285
            ||.::|
Mouse   490 HSAVLG 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 40/55 (73%)
Pax7XP_006538692.1 PAX 34..161 CDD:128645
Homeodomain 218..274 CDD:459649 40/55 (73%)
Pax7 347..385 CDD:403540 9/42 (21%)
Blue background indicates that the domain is not in the aligned region.

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