DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Otx1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_035153.1 Gene:Otx1 / 18423 MGIID:97450 Length:355 Species:Mus musculus


Alignment Length:330 Identity:89/330 - (26%)
Similarity:122/330 - (36%) Gaps:110/330 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            |||||.||||...||..||..|.:|.|||:|.|||:|::|:|.|:||||||:|||||.|:|::.|
Mouse    36 RKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSG 100

  Fly    73 G---------------------LGGDYKEGALDLDVSYDDSAVLGQLDSA------LGGG----- 105
            .                     ..|.:...|:....|...||.....:.|      |||.     
Mouse   101 NGTKTRPVKKKSSPVRESSGSESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAA 165

  Fly   106 --------------GTLLPDTPPQSSNSLDNELKA------------------------------ 126
                          .::.|.:.| :|.|:...|.|                              
Mouse   166 SSLSTPTASSIWSPASISPGSAP-TSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGG 229

  Fly   127 SYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQ----MDSDNQLQQ 187
            |||.|..:|   |.:.|            ||    ::.|:|.....:..||.    |...:....
Mouse   230 SYGQGYPAP---SSSYF------------GG----VDCSSYLAPMHSHHHPHQLSPMAPSSMAGH 275

  Fly   188 HPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMTD-----GSSAYDEMK 247
            |....||..|:...|..||......|.|....    .||.|.::..||..:     .|||: ::.
Mouse   276 HHHHPHAHHPLSQSSGHHHHHHHHHHHQGYGG----SGLAFNSADCLDYKEPAAAAASSAW-KLN 335

  Fly   248 FLSVD 252
            |.|.|
Mouse   336 FNSPD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 34/55 (62%)
Otx1NP_035153.1 Homeodomain 39..95 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..144 10/52 (19%)
TF_Otx 178..274 CDD:427350 20/115 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..306 12/48 (25%)

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