DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and dsc-1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_510497.1 Gene:dsc-1 / 181599 WormBaseID:WBGene00001096 Length:310 Species:Caenorhabditis elegans


Alignment Length:180 Identity:52/180 - (28%)
Similarity:74/180 - (41%) Gaps:51/180 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGL 74
            :||:||.|..||...||.:|:.:||||...::.:|..:.:.|.|:.|||||||||||::|.    
 Worm   180 RRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVWFQNRRAKWRRKEH---- 240

  Fly    75 GGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNE-LKASYGTGAMSPSRL 138
                    ...|.:.::|         ..||           |||.|.. ..|.:...  .|:..
 Worm   241 --------RQRDRTRNES---------FSGG-----------SNSFDFACFSAQHPDD--GPNAK 275

  Fly   139 SPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQH 188
            .||.|            |.....|....:|..|: |..|:..|   ||:|
 Worm   276 HPNSF------------GIPNQPMSLDQFPMNTE-QDFPEFPS---LQEH 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)
dsc-1NP_510497.1 Homeodomain 181..237 CDD:459649 27/55 (49%)

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