DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and ceh-36

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_510365.1 Gene:ceh-36 / 181529 WormBaseID:WBGene00000457 Length:257 Species:Caenorhabditis elegans


Alignment Length:175 Identity:58/175 - (33%)
Similarity:76/175 - (43%) Gaps:46/175 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQ---VWFQNRRAKWRKQ 68
            :|..||.||:||..||.:||:.|:.|.||||..||.||..|:|.:.|||   |||:|||||.|..
 Worm    52 RRAGRRERTSFNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQVITVWFKNRRAKDRNN 116

  Fly    69 EKIGGL-----------GGDYKEGALDLD-----------------VSYD-DSAVLGQL----DS 100
            :|:.|:           |..:.|...|..                 ..|: :||||.||    ..
 Worm   117 KKMDGVHPGSTSSRSSNGSPHNESKPDTKSLGIHIPGTPEFNAHSAAKYEANSAVLSQLQQQQQQ 181

  Fly   101 ALGGGGTLLPDTPPQSSNSLDNELK----------ASYGTGAMSP 135
            .|....:.|.|:.|.:....|:...          |||.|.|..|
 Worm   182 QLQQPKSELEDSKPLADTKYDSTQSLLPQAQAAAYASYATTAPYP 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 33/58 (57%)
ceh-36NP_510365.1 Homeodomain 56..115 CDD:459649 33/58 (57%)

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