DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and alr-1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:69 Identity:53/69 - (76%)
Similarity:58/69 - (84%) Gaps:2/69 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |.|  |||||||||||:..||.|||:.|.||||||||.|||||.|:.||||||||||||||||:|
 Worm   111 DNG--KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYR 173

  Fly    67 KQEK 70
            |||:
 Worm   174 KQER 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 43/55 (78%)
alr-1NP_509860.1 Homeodomain 118..174 CDD:459649 43/55 (78%)

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