DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and ceh-10

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_498251.1 Gene:ceh-10 / 175811 WormBaseID:WBGene00000435 Length:344 Species:Caenorhabditis elegans


Alignment Length:244 Identity:75/244 - (30%)
Similarity:109/244 - (44%) Gaps:57/244 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            |||:||:||.|...|:.|||:|||.:||||::.||.||.:.:|.|.|:|||||||||||||.||.
 Worm   133 KRKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQNRRAKWRKTEKT 197

  Fly    72 GGLGGDYKEGALDLDVSYDDSAVLGQ--LDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMS 134
            .|                 .|.::.:  |..|:......||:|..:|:.:.|.:..|        
 Worm   198 WG-----------------KSTIMAEYGLYGAMVRHSLPLPETITKSAEAADPQQSA-------- 237

  Fly   135 PSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIH 199
                :|.:        ||:.:    .|||.:.:....:.......|.|::....|.|:...:...
 Worm   238 ----APWL--------LGMHK----KSMEAAAHLESVEKCDMSDSDDDDRPVTPPVQRQVKNEYK 286

  Fly   200 AGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMTDGSSAYDEMKF 248
            .....|.|||..|||.         .|.|..||.:     ||:..::.|
 Worm   287 PRIIEHVQQQAPQHQS---------SLNFDTSLVV-----SSSLSQLHF 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 34/55 (62%)
ceh-10NP_498251.1 Homeodomain 137..193 CDD:459649 34/55 (62%)

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