DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and ceh-43

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001338832.1 Gene:ceh-43 / 175581 WormBaseID:WBGene00000463 Length:282 Species:Caenorhabditis elegans


Alignment Length:69 Identity:18/69 - (26%)
Similarity:27/69 - (39%) Gaps:18/69 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GLEHLHRVTTARKHELMVELKDFDGNYIY------ARYDEFAIGSEDEQYPLMKLG----SYTGT 62
            ||.:||     .:.:..:..:||..:.|.      |:..:|.:.   .|.|...||    |..||
 Worm   104 GLAYLH-----EEMDFQLIFRDFKSSNILLDERFGAKLSDFGLA---RQGPPEGLGHVSTSVVGT 160

  Fly    63 AGDA 66
            .|.|
 Worm   161 VGYA 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 16/66 (24%)
ceh-43NP_001338832.1 Homeodomain 103..168 CDD:459649 18/69 (26%)

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