DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and unc-4

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_496138.1 Gene:unc-4 / 174544 WormBaseID:WBGene00006744 Length:252 Species:Caenorhabditis elegans


Alignment Length:178 Identity:67/178 - (37%)
Similarity:93/178 - (52%) Gaps:27/178 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |.|....|:||.||.|:..||:|||.||:.:||||||.||.||:|:||.|:||||||||||||||
 Worm    80 DTGESAAKRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQNRRAKWR 144

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTG 131
            |:|:       .:.|:  .::..||..   |:::      ..||..|    .|:|:.|..|....
 Worm   145 KREQ-------NRNGS--SEIKKDDGE---QMET------KALPTFP----FSIDSILAVSRVPR 187

  Fly   132 AMSPSRLSPNI--FLNLN---IDHLGLERGGSGLSMEWSTYPPQTQAQ 174
            ...|:...|.:  ..||:   |....:.:.|..:..|.|...|..|:|
 Worm   188 GRRPNAKYPRVQACKNLSPFMIPLFPITQPGGNVIREKSPPLPTQQSQ 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 39/55 (71%)
unc-4NP_496138.1 Homeodomain 89..145 CDD:459649 39/55 (71%)

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