DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Phox2a

DIOPT Version :9

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_032913.1 Gene:Phox2a / 11859 MGIID:106633 Length:280 Species:Mus musculus


Alignment Length:213 Identity:77/213 - (36%)
Similarity:99/213 - (46%) Gaps:40/213 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            ||||||.||||.:.||:||||.|..|||||::.|||||::||||||||||||||||||:||||:.
Mouse    87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERA 151

  Fly    72 GGLGG-----DYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSL------DNELK 125
            ....|     ..|:|........|||.     :|............||..:.||      .:.|.
Mouse   152 ASAKGAAGATGAKKGEARCSSEDDDSK-----ESTCSPTPDSTASLPPPPAPSLASPRLSPSPLP 211

  Fly   126 ASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPP 190
            |:.|:|. .|..|...::       .|:..||.|                .|...:...|:...|
Mouse   212 AALGSGP-GPQPLKGALW-------AGVAGGGGG----------------GPGTGAAELLKAWQP 252

  Fly   191 QQHASDPIHAGSSSHHQQ 208
            .:....|.....||.|::
Mouse   253 AEPGPGPFSGVLSSFHRK 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 39/51 (76%)
Phox2aNP_032913.1 Homeobox 94..147 CDD:395001 39/52 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..244 26/127 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..280 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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