DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Alx4

DIOPT Version :9

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 / 11695 MGIID:108359 Length:399 Species:Mus musculus


Alignment Length:185 Identity:66/185 - (35%)
Similarity:94/185 - (50%) Gaps:41/185 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |..:.|.|:||.||||.:.||:|||:.||:||||||:.||:||:|.|||||||||||||||||||
Mouse   194 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 258

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYD-------DSAVLGQLDSALGGGGTLLP-------------- 110
            |:|:.|.:    ::.......:|:       ::....|..|.:|..|...|              
Mouse   259 KRERFGQM----QQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 319

  Fly   111 ----DTPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLS 161
                ..||.|..|..::..:..|.|:            ::...|:|...|.:|:|
Mouse   320 MSPHAHPPGSGASSVSDFLSVSGAGS------------HVGQTHMGSLFGAAGIS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 39/51 (76%)
Alx4NP_031468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..206 5/11 (45%)
Homeobox 206..258 CDD:278475 39/51 (76%)
OAR 375..392 CDD:281777
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 379..392
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43910
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X469
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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