DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and hoxa4

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_004915454.1 Gene:hoxa4 / 101734089 XenbaseID:XB-GENE-486676 Length:251 Species:Xenopus tropicalis


Alignment Length:61 Identity:25/61 - (40%)
Similarity:37/61 - (60%) Gaps:0/61 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            :|.||.:...|:.|||:.|....|.....|.|:|..:.|:|.:|::||||||.||:|..|:
 Frog   158 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 23/55 (42%)
hoxa4XP_004915454.1 Homeodomain 158..214 CDD:459649 23/55 (42%)

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