DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and pitx3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002935807.2 Gene:pitx3 / 100496690 XenbaseID:XB-GENE-486162 Length:292 Species:Xenopus tropicalis


Alignment Length:244 Identity:82/244 - (33%)
Similarity:112/244 - (45%) Gaps:55/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            :.||:|:||||.||.|.:.||||||..|||..|||:..|||:||..:||||||:|||:|||||||
 Frog    52 EDGTLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR 116

  Fly    67 KQEK--------------IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLP-----DT 112
            |:|:              ..||...|.:  :....||::.|..|...|.|....  .|     :.
 Frog   117 KRERNQQAELCKNSFGAQFNGLMQPYDD--MYSGYSYNNWATKGLATSPLSAKS--FPFFNSMNV 177

  Fly   113 PPQSSN---SLDNELKASYGTGAMSPSRLS--PNIFLNL--NIDHLGLERGGSGLSMEWSTYPPQ 170
            .|.||.   |..|.:.:.....:|.||.::  |...||.  ||::|......|.:|.  |..|..
 Frog   178 SPLSSQPMFSPPNSIASMTMPSSMVPSAVTGVPGSSLNNLGNINNLNSPSLNSAVSA--SACPYA 240

  Fly   171 TQAQTHPQMDSDN--------QLQQH---------------PPQQHASD 196
            :.|..:...|:.|        :.:||               .|.|:|.|
 Frog   241 STASPYMYRDTCNSSLASLRLKAKQHANFTYPAVQTPASNLSPCQYAVD 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 37/55 (67%)
pitx3XP_002935807.2 Homeodomain 61..117 CDD:459649 37/55 (67%)
OAR 250..267 CDD:461067 3/16 (19%)

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