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Protein Alignment Pph13 and rax2
DIOPT Version :9
| Sequence 1: | NP_477330.1 |
Gene: | Pph13 / 33239 |
FlyBaseID: | FBgn0023489 |
Length: | 357 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_002941436.1 |
Gene: | rax2 / 100494721 |
XenbaseID: | XB-GENE-494483 |
Length: | 227 |
Species: | Xenopus tropicalis |
| Alignment Length: | 184 |
Identity: | 73/184 - (39%) |
| Similarity: | 90/184 - (48%) |
Gaps: | 45/184 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
|....|:|.||.||||.|.||.||||||:|:|||||:.|||||:::.|.|.||||||||||||||
Frog 28 DNELPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNRRAKWR 92
Fly 67 KQEKIGGLGGDYKEGALDLDVS---YDDSAVLGQLDSALGGG-GTLLPDTP--PQSSNSLDNELK 125
:||| |:.| ..||.:|....|.:..| |.|....| |..::.:.....
Frog 93 RQEK--------------LETSSSKLHDSPLLSFSRSPMATGVGPLSNTLPLEPWLTSPIPGTTT 143
Fly 126 ASYGTGAMSPSR-LSP----NIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQ 174
.......|:||: |.| :.||| || ||.|..|
Frog 144 VHSMPAFMAPSQALQPTYQSHTFLN------------SG--------PPMTPIQ 177
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Pph13 | NP_477330.1 |
Homeobox |
14..66 |
CDD:278475 |
38/51 (75%) |
| rax2 | XP_002941436.1 |
Homeobox |
40..93 |
CDD:365835 |
39/52 (75%) |
| OAR |
200..216 |
CDD:367680 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D454642at33208 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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