DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and dmbx1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_017949066.1 Gene:dmbx1 / 100493907 XenbaseID:XB-GENE-486746 Length:367 Species:Xenopus tropicalis


Alignment Length:361 Identity:100/361 - (27%)
Similarity:141/361 - (39%) Gaps:91/361 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ 68
            |:..|||||.||.|...||:.||:.||:||||||..||.||:..:|.||||||||:|||||:||:
 Frog    65 GSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129

  Fly    69 EKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAM 133
            ::                 |.....:..|.||.:.........||..|:.|..:..||.......
 Frog   130 QR-----------------SLQKEQLQKQKDSEVSNSEGKTESTPADSATSNQDSKKAHSSVNDS 177

  Fly   134 SPSRLSPNIFLNLNIDHLGLERGGSGLSMEWST----------YPPQTQ------------AQTH 176
            |       :.|||.:.    |:..|..:.|..|          ..|:|:            .:..
 Frog   178 S-------VELNLTLS----EQSASESAAEEHTDKEEEPKTPKEEPKTEKNPIADTKPLNCKRAS 231

  Fly   177 PQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMTDGSS 241
            |:.:|.......|.......|.|:.|||.....:.|.|..||....:..:.::   |.||....:
 Frog   232 PKTESPVSSTMTPSSSSCLTPTHSYSSSPLSLFRLQEQFRQHMAATNNLVHYS---SFDMASPPA 293

  Fly   242 AYDEMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYGGHSQLVGSSNELCLDGIGMSSFGMEEGE 306
                :.:|.::|....:.|...       ||..|:. .|:|.|.||..|      .||.|     
 Frog   294 ----VPYLGMNVSMAPLSSLHC-------QSYYQSL-SHAQQVWSSPIL------QSSGG----- 335

  Fly   307 PKSPPSLLVLDKSLPSLSIGVEGIADLVEQLHHHQH 342
                         ||||:.....|.:|  :|...||
 Frog   336 -------------LPSLNSKTTSIENL--RLRAKQH 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 35/55 (64%)
dmbx1XP_017949066.1 Homeodomain 72..128 CDD:459649 35/55 (64%)

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