DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and uncx

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001305673.1 Gene:uncx / 100492016 XenbaseID:XB-GENE-920201 Length:483 Species:Xenopus tropicalis


Alignment Length:403 Identity:111/403 - (27%)
Similarity:157/403 - (38%) Gaps:109/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            ||.:...|:||.||.|...||:|||:||..:||||||.||.||:|:||.|:||||||||||||||
 Frog    93 DKESPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLVESRVQVWFQNRRAKWR 157

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTP----------------PQ 115
            |:|       :.|:|......:...:...|:            |..|                .|
 Frog   158 KKE-------NTKKGPGRPAHNSHPTTCSGE------------PMDPEEIARKELEKMEKKKRKQ 203

  Fly   116 SSNSLDNELKASYGTGAMS---PSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHP 177
            ....|.|:.:..:..|.||   ||..|.: .|:.|:|...||          |::|...|:::..
 Frog   204 EKKMLRNQNRLQHSPGDMSLHTPSSDSDS-GLSQNLDSSSLE----------SSHPDMGQSRSQT 257

  Fly   178 QMDSDN------QLQQHPPQQ-HASD---PIHAGSSSHHQQQQQQHQQEQHN------------P 220
            |...|.      |.|::..|: ..||   |:.|..:|......:....::.|            |
 Frog   258 QASCDQTGQAFFQSQRNTGQRDRVSDKESPVEANHNSGLCPNGRGAAFQKLNPFSVESLLSDSPP 322

  Fly   221 QLHPGLEFAASLSLDMTDGSS---AYDEMKFLSVDVDQFTIDSFKADCILS--MEQSQMQAYGGH 280
            :...|:||....:.....|..   .|...:.|...|.|.:|.|..|..:.|  ::.|...:..|.
 Frog   323 KRKTGIEFPGLTNPRTLIGKGHFLLYPITQPLGFIVPQASIKSNSAQELPSPGIKDSLHNSNSGQ 387

  Fly   281 SQLVGSSNE-------------------LCL----DGIGMSSFGMEEG---------EPKSPPSL 313
            ..|..|.|.                   :|.    |..|.:|...:.|         |||||.| 
 Frog   388 PSLNTSPNSAQNLYPNKHTNSTQSTTLTVCKTENGDHHGATSSSGDTGTEQLDSTYSEPKSPKS- 451

  Fly   314 LVLDKSLPSLSIG 326
            |..|:..|....|
 Frog   452 LKSDRETPECPNG 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 39/55 (71%)
uncxNP_001305673.1 homeobox domain 101..160 41/58 (71%)
Homeodomain 102..158 CDD:459649 39/55 (71%)

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