DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and pax10

DIOPT Version :9

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001373372.1 Gene:pax10 / 100192208 ZFINID:ZDB-GENE-081022-10 Length:275 Species:Danio rerio


Alignment Length:232 Identity:75/232 - (32%)
Similarity:102/232 - (43%) Gaps:60/232 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEK 70
            :|||.:|.||:|...|:..||:.|:||||||||.||.||.:|||.|||:||||.|||||||::||
Zfish    70 LKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 134

  Fly    71 I-----GGLGGDYKEGALDLDVSYD-----------DSAVLGQLDSALGGGGTL-----LPDTPP 114
            :     .|......:....|..|::           ..::..:.||:|.|..:|     :...|.
Zfish   135 LRNQRRSGSSSSCSQTHTPLSTSFNSPVYHSHHSNSSGSMHSRSDSSLSGYSSLSVFSSMQSLPS 199

  Fly   115 QSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQM 179
            ||:.:....|..       |||.|.|   |:...|               |:|       |.|.:
Zfish   200 QSTPTYSCMLPP-------SPSALPP---LSRKFD---------------SSY-------TSPHL 232

  Fly   180 DSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQE 216
            ..       ||...|:....||.|:..|...|...||
Zfish   233 PP-------PPTASANTGFFAGVSAAGQTAVQGGDQE 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 34/51 (67%)
pax10NP_001373372.1 Homeobox 78..131 CDD:395001 35/52 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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