Protein Alignment Pph13 and hoxc3

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: XP_002936696.1
• Gene: hoxc3 / 100190990
• XenbaseID: XB-GENE-5997986
• Length: 394
• Species: Xenopus tropicalis
• Alignment Length: 266
• Identity: 66/266 - (24%)
• Similarity: 93/266 - (34%)
• Gaps: 82/266 - (30%)

  Fly     1 MDKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 65
            :|...:....:|.||.:...||.|||:.|....|.....|.|:|..::|:|.::::||||||.|:
 Frog   154 VDSSFLSSASKRARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQIKIWFQNRRMKF 218

  Fly    66 RKQEKIGGLGGDYKEGA-----------------LDLDVSYDDSAVLGQLDSALG---------- 103
            :|..|  |.||....|.                 ||.|..|:.....|..:.:.|
 Frog   219 KKDHK--GKGGGGSPGGLSPSSSPSLMPYSGNLPLDGDCGYEVPMATGAYNKSPGNMYGLTAYSA 281

  Fly   104 ------------GGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLG--LE 154
                        |..:|.|:..|.|... ||    :|.|..:      ||     ...:||  ||
 Frog   282 PLFEGPSAQKRYGPQSLAPEYDPHSMQG-DN----NYDTSGL------PN-----GQGYLGNYLE 330

  Fly   155 RGGSGLSMEWSTYPPQTQAQTHPQMDS-DNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQH 218
            .|....||  .:.|       ||..:| |.......|.:|     |.|....|......|
 Frog   331 NGSESCSM--FSLP-------HPSSESMDYSCAAQTPSKH-----HLGPCDPHPTYTDLH----- 376

  Fly   219 NPQLHP 224
               :||
 Frog   377 ---IHP 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	22/55 (40%)
hoxc3	XP_002936696.1	Homeodomain	164..220	CDD:459649	22/55 (40%)
		DUF4074	335..392	CDD:463833	15/67 (22%)