DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and meox2

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001116898.1 Gene:meox2 / 100144655 XenbaseID:XB-GENE-852818 Length:300 Species:Xenopus tropicalis


Alignment Length:129 Identity:43/129 - (33%)
Similarity:63/129 - (48%) Gaps:26/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRK 67
            |..:..|.|:.||.|...|::|||..|...:|.....|.|:||.:||||.:|:|||||||.||::
 Frog   176 KSDVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 240

  Fly    68 QEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLP--------DTPPQSSNSLDNE 123
            .:     ||.....|.:.:        ||.:..     |||||        .:...:::||.|:
 Frog   241 VK-----GGQQGAAAREKE--------LGNVKK-----GTLLPSELSGIRSSSLQHTADSLTND 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 28/55 (51%)
meox2NP_001116898.1 Homeodomain 184..240 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.