DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and phox2b

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001116492.1 Gene:phox2b / 100124329 XenbaseID:XB-GENE-1000415 Length:293 Species:Xenopus tropicalis


Alignment Length:187 Identity:77/187 - (41%)
Similarity:96/187 - (51%) Gaps:32/187 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTM--KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAK 64
            |.|.:  ||||||.||||.:.||:||||.|..|||||::.|||||::||||||||||||||||||
 Frog    88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 152

  Fly    65 WRKQEKI---------GGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTP-----PQ 115
            :||||:.         .|..|...:.:.|.:.....||   ..||. ||.|.....||     |.
 Frog   153 FRKQERAAAAAAAAAKNGSSGKKSDSSRDEESKDSKSA---DPDST-GGPGNNPNPTPSCGGGPS 213

  Fly   116 SSNSLDNELKASYG-TGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQT 171
            .|.:..|.:....| .|...|..|:       :...:|:..|..|    |:|.|..|
 Frog   214 PSGAQGNGVPQEPGKVGVPGPGSLT-------SASVVGVSGGPQG----WATGPGGT 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 41/55 (75%)
phox2bNP_001116492.1 Homeodomain 99..155 CDD:459649 41/55 (75%)

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