DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and prop1

DIOPT Version :9

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001170932.2 Gene:prop1 / 100001377 ZFINID:ZDB-GENE-081107-40 Length:227 Species:Danio rerio


Alignment Length:75 Identity:42/75 - (56%)
Similarity:54/75 - (72%) Gaps:5/75 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKR-----KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNR 61
            |.|...|     .:||:||||:..||:.||.||::.||||:::|||||....|.|||:|||||||
Zfish    43 DGGARARPYPSPSRRRHRTTFSNEQLEHLELAFRQNHYPDIYYREELARVTKLNEARIQVWFQNR 107

  Fly    62 RAKWRKQEKI 71
            |||.|||::|
Zfish   108 RAKQRKQDRI 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 33/51 (65%)
prop1NP_001170932.2 Homeobox 59..112 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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