DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and prop1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001170932.3 Gene:prop1 / 100001377 ZFINID:ZDB-GENE-081107-40 Length:227 Species:Danio rerio


Alignment Length:204 Identity:68/204 - (33%)
Similarity:88/204 - (43%) Gaps:55/204 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKR-----KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNR 61
            |.|...|     .:||:||||:..||:.||.||::.||||:::|||||....|.|||:|||||||
Zfish    43 DGGARARPYPSPSRRRHRTTFSNEQLEHLELAFRQNHYPDIYYREELARVTKLNEARIQVWFQNR 107

  Fly    62 RAKWRKQEKIGGLGGDYKEGALDLDVSYDDSAVLGQL-------DSALGGGGTL---LPDTPPQS 116
            |||.|||::|     ..|..|:.:      ..|.|.|       .||:|.....   ||..|..|
Zfish   108 RAKQRKQDRI-----TQKSLAVSM------MPVRGPLFSTMCVSSSAMGRQCQCPHSLPHVPQFS 161

  Fly   117 SNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDS 181
            |              .:.|....|:            ...||..|....:.|.|...|.:   |.
Zfish   162 S--------------VLPPGGYPPH------------PSSGSQFSSPSGSLPSQANRQPN---DW 197

  Fly   182 DNQLQQHPP 190
            .|||:...|
Zfish   198 YNQLRNIGP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 35/55 (64%)
prop1NP_001170932.3 None

Return to query results.
Submit another query.