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Protein Alignment cold and Lypd8
DIOPT Version :9
Sequence 1: | NP_001259838.1 |
Gene: | cold / 33237 |
FlyBaseID: | FBgn0031268 |
Length: | 153 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001077353.1 |
Gene: | Lypd8 / 70163 |
MGIID: | 1917413 |
Length: | 255 |
Species: | Mus musculus |
Alignment Length: | 118 |
Identity: | 23/118 - (19%) |
Similarity: | 42/118 - (35%) |
Gaps: | 23/118 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 VLVAAVYLCSQVNFVAGLECYVC----SNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFSE 69
|.:|.|.....:..|..|.|..| |...|...:|.....:| .|:...:.:
Mouse 4 VFIAGVIAAFAITVVDSLNCTQCYTYNSTCDGQATECNEQSFSC--VESSINSTL---------- 56
Fly 70 GALKQYYVSKRCMTKEQCQSKRKRYMQLYCTHIWYEDWA---CNECCKGDRCN 119
|.....|.:|.|......::..: ..:..|: ::|.. .::||:|:.||
Mouse 57 GGFLHVYQNKFCSASNCTENSTE---VAFTVHL-FDDQRYHFASQCCQGESCN 105
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cold | NP_001259838.1 |
LU |
26..119 |
CDD:299177 |
17/99 (17%) |
Lypd8 | NP_001077353.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR20914 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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