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Protein Alignment cold and Pinlyp
DIOPT Version :9
Sequence 1: | NP_001259838.1 |
Gene: | cold / 33237 |
FlyBaseID: | FBgn0031268 |
Length: | 153 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001032220.1 |
Gene: | Pinlyp / 641361 |
MGIID: | 3615324 |
Length: | 212 |
Species: | Mus musculus |
Alignment Length: | 112 |
Identity: | 30/112 - (26%) |
Similarity: | 45/112 - (40%) |
Gaps: | 16/112 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 LVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFSEGALKQ 74
|:|...||:.:.....|.|.||. |:...|...:||||..::.|...:...| ::|. |.
Mouse 11 LLAFTLLCTLLGLGCPLTCEVCK---GSGHTCSGKMKTCEDGKDACVVLVSESS----TKGR-KS 67
Fly 75 YYVSKRCMTKEQCQSKRKRYMQLYCTHIWYEDWACN--ECCKGDRCN 119
....|.||..:.| |.....|.:...|:..: .||:.|.||
Mouse 68 VNTFKACMKYKDC------YSGFVSTTMTPSDYMVSNAHCCQSDGCN 108
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cold | NP_001259838.1 |
LU |
26..119 |
CDD:299177 |
24/94 (26%) |
Pinlyp | NP_001032220.1 |
LU |
27..107 |
CDD:385681 |
24/93 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR20914 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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