DRSC/TRiP Functional Genomics Resources

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Protein Alignment cold and LY6G6D

DIOPT Version :9

Sequence 1:NP_001259838.1 Gene:cold / 33237 FlyBaseID:FBgn0031268 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_067069.2 Gene:LY6G6D / 58530 HGNCID:13935 Length:133 Species:Homo sapiens


Alignment Length:140 Identity:31/140 - (22%)
Similarity:43/140 - (30%) Gaps:21/140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VYLCSQVNFVAG--LECYVCSNQTGNTEKCLNTIKTCEPFENVCGTE-IRWGSQPYFSEGALKQY 75
            :.|.|.:....|  :.||.|.....::  |...:.||.......|.| |:....|     .:...
Human     8 ILLSSLLGAALGNRMRCYNCGGSPSSS--CKEAVTTCGEGRPQPGLEQIKLPGNP-----PVTLI 65

  Fly    76 YVSKRCMTKEQCQSKRKRYM--QLYCTHIWYEDWACNECCKGDRCNYFVISGAPSRQGYGVCLTL 138
            :....|:....|.......:  ..|..|        .:|..||.||..|.|............|.
Human    66 HQHPACVAAHHCNQVETESVGDVTYPAH--------RDCYLGDLCNSAVASHVAPAGILAAAATA 122

  Fly   139 LTALLGLGSW 148
            ||.||. |.|
Human   123 LTCLLP-GLW 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coldNP_001259838.1 LU 26..119 CDD:299177 17/95 (18%)
LY6G6DNP_067069.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1493078at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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