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Protein Alignment cold and Ly6g6d
DIOPT Version :9
Sequence 1: | NP_001259838.1 |
Gene: | cold / 33237 |
FlyBaseID: | FBgn0031268 |
Length: | 153 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_258439.1 |
Gene: | Ly6g6d / 114654 |
MGIID: | 2148931 |
Length: | 135 |
Species: | Mus musculus |
Alignment Length: | 140 |
Identity: | 37/140 - (26%) |
Similarity: | 46/140 - (32%) |
Gaps: | 46/140 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 CYVCSNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFSEGALKQYYVSKRCMTKEQCQSKRK 92
||.|.. |.:..|..|:.||...|. ||...| ..|| .||.| |:...:...
Mouse 24 CYDCGG--GPSNSCKQTVITCGEGER-CGFLDR-KPQP-SSEQA------------KQPSATLSH 71
Fly 93 RYMQLYCTHIWYEDWACNE----------------CCKGDRCNYFVISGAPSRQGYGVCLTLLTA 141
.|.....|| .||: ||.||.||..|.|.... |.:|.|
Mouse 72 HYPACVATH------HCNQVAIESVGDVTFTTQKNCCFGDLCNSAVASSVTP-------LCILAA 123
Fly 142 LLGLGSWLIP 151
.:...:||:|
Mouse 124 AVTTLAWLLP 133
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cold | NP_001259838.1 |
LU |
26..119 |
CDD:299177 |
27/106 (25%) |
Ly6g6d | NP_258439.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1493078at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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