DRSC/TRiP Functional Genomics Resources

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Protein Alignment cold and ly6m5

DIOPT Version :10

Sequence 1:NP_608536.1 Gene:cold / 33237 FlyBaseID:FBgn0031268 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_021324603.1 Gene:ly6m5 / 101882984 ZFINID:ZDB-GENE-131127-265 Length:199 Species:Danio rerio


Alignment Length:214 Identity:43/214 - (20%)
Similarity:67/214 - (31%) Gaps:91/214 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EIAVVLVAAVYLCSQVNFVAG--LECYVCSNQTG----NTEK-CLNTIKTCEPFENV-------- 54
            :::|:|:.       |.|.:|  |.||.|.:..|    .||: |.:.:..||....|        
Zfish     4 QVSVLLLF-------VTFTSGHSLSCYQCDDLMGLCRFQTERTCPSGLSKCESVTVVRQLGTTSF 61

  Fly    55 ------CGTEIRWGSQPYFSEGALKQYYVSKRCMTKEQCQSK---------RKRYMQLYC----- 99
                  |..:...|:..:    .:.|  :|..|...:||..|         ....|..||     
Zfish    62 TVKAKACSADCASGTMNF----GISQ--MSSTCCNSDQCNKKDAPVPSTGTPNGKMCYYCDENNC 120

  Fly   100 ----THIWYEDWA----------------------CN----------ECCKGDRCNYFVISGAPS 128
                ::...||..                      |:          .||.|:.||     ||.|
Zfish   121 FNALSYSGREDHCITATGTFAGESVIVKGCASKSICDGKKMGAFKNFSCCSGNLCN-----GAKS 180

  Fly   129 -RQGY-GVCLTLLTALLGL 145
             .|.: .:|..|:..:|.|
Zfish   181 VTQSFLFLCFPLIAFILML 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
coldNP_608536.1 TFP_LU_ECD_Cold 26..121 CDD:467128 30/163 (18%)
ly6m5XP_021324603.1 TFP 18..95 CDD:480272 17/82 (21%)
TFP 105..178 CDD:480272 11/77 (14%)

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