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Protein Alignment cold and lypc
DIOPT Version :9
Sequence 1: | NP_001259838.1 |
Gene: | cold / 33237 |
FlyBaseID: | FBgn0031268 |
Length: | 153 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001373229.1 |
Gene: | lypc / 100538040 |
ZFINID: | ZDB-GENE-131127-361 |
Length: | 126 |
Species: | Danio rerio |
Alignment Length: | 143 |
Identity: | 35/143 - (24%) |
Similarity: | 54/143 - (37%) |
Gaps: | 27/143 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IAVVL--VAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFS 68
:|.|| :..:||... |..|.||.|...:.:...||.....|. ...|| ..|:....
Zfish 1 MAYVLRCILFLYLLPS---VVPLLCYTCVFPSISPLDCLKFPTKCS-LGQVC-----LSSKAVAR 56
Fly 69 EGALKQYYVSKRCMTKEQCQSKRKRYMQ-LYCTHIWYEDWACNECCKGDRCNYFVISGA---PSR 129
.|.|:.::..|.|.....|....::::| |..|. .::||....||:...:.| ||
Zfish 57 RGDLEIHFYEKSCALPALCGLTGEKFIQGLNFTF-------RSDCCDTLLCNHSTANSAFVWPS- 113
Fly 130 QGYGVCLTLLTAL 142
:.|:||..|
Zfish 114 ----ILLSLLFTL 122
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
cold | NP_001259838.1 |
LU |
26..119 |
CDD:299177 |
20/93 (22%) |
lypc | NP_001373229.1 |
LU |
22..101 |
CDD:415855 |
19/91 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1493078at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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