DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nle and wdr5

DIOPT Version :10

Sequence 1:NP_477294.2 Gene:Nle / 33234 FlyBaseID:FBgn0021874 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001011411.1 Gene:wdr5 / 496891 XenbaseID:XB-GENE-493883 Length:334 Species:Xenopus tropicalis


Alignment Length:117 Identity:27/117 - (23%)
Similarity:42/117 - (35%) Gaps:22/117 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 IVEEDFTPEQIEHIKRGLRQIESVTCLKFVTRTEEPDYVRVIGTGSGC-YSSVGHRGGAQTLNLE 149
            ::.:..|...|..:.....|||....|:      .||     |...|| :.:...|..|||....
 Frog   114 MISKKCTENDIRVMFSSFGQIEECRILR------GPD-----GLSRGCAFVTFTTRAMAQTAIKA 167

  Fly   150 PYDVDT--GCFRLATIVHEFIHAVGFYHQQSASD--RDQFVQI----VWDNI 193
            .:...|  ||  .:.:|.:|........|:..:.  :.|..||    ||.|:
 Frog   168 MHQAQTMEGC--SSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NleNP_477294.2 NLE 22..82 CDD:462380
WD40 84..486 CDD:441893 27/117 (23%)
WD40 repeat 123..159 CDD:293791 10/38 (26%)
WD40 repeat 164..202 CDD:293791 9/36 (25%)
WD40 repeat 208..249 CDD:293791
WD40 repeat 254..289 CDD:293791
WD40 repeat 296..372 CDD:293791
WD40 repeat 378..414 CDD:293791
WD40 repeat 420..456 CDD:293791
WD40 repeat 462..486 CDD:293791
wdr5NP_001011411.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
WD40 <36..330 CDD:441893 27/117 (23%)
WD 1 43..82
WD40 repeat 48..85 CDD:293791
WD 2 85..126 2/11 (18%)
WD40 repeat 91..127 CDD:293791 2/12 (17%)
WD 3 128..168 13/50 (26%)
WD40 repeat 132..168 CDD:293791 13/46 (28%)
WD 4 169..208 7/40 (18%)
WD40 repeat 175..210 CDD:293791 8/36 (22%)
WD 5 212..253 3/6 (50%)
WD40 repeat 217..253 CDD:293791 0/1 (0%)
WD 6 256..296
WD40 repeat 261..298 CDD:293791
WD 7 299..333
WD40 repeat 304..330 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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