DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nle and wdr-5.2

DIOPT Version :10

Sequence 1:NP_477294.2 Gene:Nle / 33234 FlyBaseID:FBgn0021874 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_510394.1 Gene:wdr-5.2 / 181540 WormBaseID:WBGene00010572 Length:395 Species:Caenorhabditis elegans


Alignment Length:437 Identity:110/437 - (25%)
Similarity:187/437 - (42%) Gaps:87/437 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ASVDTENVI---DIVYQPQ-AVFKVRPVTRCTSSM----PGH-------------AEAVVSLNFS 128
            ||.|.|..|   :...||. .|..:||:...:.:|    |||             |:|...:..|
 Worm     7 ASQDEEQAIVGAETGSQPSLPVSPMRPIIAPSPAMVLPTPGHGMGIPQFGPVGLPAQASTPMLSS 71

  Fly   129 PDGAHLASG----SGDTTVRLW---DLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSII 186
            ..|...:|.    ...:...||   .|..|.|:    .||:.:..:.::|||:.:.||....||.
 Worm    72 TPGPSYSSAPTPMPNPSAANLWPTYKLVAEIPN----AHKKSISGIKFSPDGRYMGSGSADCSIK 132

  Fly   187 IWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHT 251
            ||..:...:|  .|.||:..||..:|     ..:.:.:.|.|.|...:::||..|:|:..:.|||
 Worm   133 IWRMDFVYEK--TLMGHRLGINEFSW-----SSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHT 190

  Fly   252 NAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVK 315
            |.|....:..:| ||.:.|.|.|:::|.|.:|....:..||...|:::..:.|     |.:    
 Worm   191 NYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRD-----GAY---- 246

  Fly   316 DRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQN-VVN 379
                                            |.|.|.|..:.:|.:....||:.:...:: .:.
 Worm   247 --------------------------------LASGSYDGIVRIWDSTTGTCVKTLIDEEHPPIT 279

  Fly   380 DVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWS---ADSRLIVSGSKDSTL 441
            .||:||:.|.|.:::.:.:::||.....:.:..:.||..:.|.||.:   ...:.|||||:|..:
 Worm   280 HVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKV 344

  Fly   442 KVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGG--KDKVIKLW 486
            .:|::||:::.|.|.||...|...|..|..:.:||..  .|..||:|
 Worm   345 YIWNLQTREILQTLDGHNTAVMCTDCHPGQNIIASAALEPDMRIKIW 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NleNP_477294.2 NLE 22..82 CDD:462380
WD40 84..486 CDD:441893 109/435 (25%)
WD40 repeat 123..159 CDD:293791 8/42 (19%)
WD40 repeat 164..202 CDD:293791 11/37 (30%)
WD40 repeat 208..249 CDD:293791 9/40 (23%)
WD40 repeat 254..289 CDD:293791 10/35 (29%)
WD40 repeat 296..372 CDD:293791 9/75 (12%)
WD40 repeat 378..414 CDD:293791 8/35 (23%)
WD40 repeat 420..456 CDD:293791 13/38 (34%)
WD40 repeat 462..486 CDD:293791 8/25 (32%)
wdr-5.2NP_510394.1 PHA03378 <3..89 CDD:223065 19/81 (23%)
WD40 106..392 CDD:238121 86/334 (26%)
WD40 repeat 110..146 CDD:293791 11/37 (30%)
WD40 repeat 152..188 CDD:293791 9/40 (23%)
WD40 repeat 193..229 CDD:293791 10/35 (29%)
WD40 repeat 236..271 CDD:293791 9/75 (12%)
WD40 repeat 278..314 CDD:293791 8/35 (23%)
WD40 repeat 322..359 CDD:293791 12/36 (33%)
WD40 repeat 365..391 CDD:293791 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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