DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nle and W07E6.2

DIOPT Version :9

Sequence 1:NP_477294.2 Gene:Nle / 33234 FlyBaseID:FBgn0021874 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_493745.1 Gene:W07E6.2 / 173439 WormBaseID:WBGene00021074 Length:473 Species:Caenorhabditis elegans


Alignment Length:476 Identity:254/476 - (53%)
Similarity:326/476 - (68%) Gaps:22/476 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IQARLVS-DTGEEAGPPIDLPAGITTQQLGLICNALL-KNEEATPYLFFVGE-----DEIKKSLE 79
            |....|| |..|..|..|.:|..|:|.:|.::||.|| .:::..|..||..|     |.|:||||
 Worm     7 ISVSFVSEDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIRKSLE 71

  Fly    80 DTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVR 144
            :      :|.|..:.:||||||||:|||||||::|:|||.|.|:|..|||||..|||||||.|:|
 Worm    72 E------IDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMR 130

  Fly   145 LWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINC 209
            :||:..|.|..||..||.||||::|:||..::||.||.|.|.||:.:||:|.|:.|..||:.|..
 Worm   131 IWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITS 195

  Fly   210 LAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTV 274
            |||:|.|:||.||.|||...||:..|||...|..:..::|||.:||.:||||.||||:.|:||||
 Worm   196 LAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIYSGSQDRTV 260

  Fly   275 KMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQA 339
            |||||.||::||..:|||||:|.:||:|||.|||..|.|.|...|..   :.||.|:.|..||:|
 Worm   261 KMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPD---TVEECQKVAQTRYEA 322

  Fly   340 VCPDEV---ESLVSCSDDNTLYLWRNNQNK-CVERMTGHQNVVNDVKYSPDVKLIASASFDKSVR 400
            ..  |:   |.|||.|||.||::|...:.| .:.|||||..:||.|.:|||.:.||||||||||:
 Worm   323 AL--EIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVK 385

  Fly   401 LWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGV 465
            ||....|:|:|:.||||..||.|||||||||:||||.||||||:.::||.|..:||||.||||.|
 Worm   386 LWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTV 450

  Fly   466 DWAPDGSRVASGGKDKVIKLW 486
            ||:|:|::|.|||||||:|||
 Worm   451 DWSPEGTKVVSGGKDKVLKLW 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NleNP_477294.2 NLE 22..82 CDD:285380 25/66 (38%)
WD40 110..147 CDD:278812 23/36 (64%)
WD40 112..486 CDD:225201 210/377 (56%)
WD40 repeat 123..159 CDD:293791 21/35 (60%)
WD40 153..487 CDD:238121 188/338 (56%)
WD40 repeat 164..202 CDD:293791 19/37 (51%)
WD40 repeat 208..249 CDD:293791 18/40 (45%)
WD40 repeat 254..289 CDD:293791 24/34 (71%)
WD40 repeat 296..372 CDD:293791 33/79 (42%)
WD40 repeat 378..414 CDD:293791 21/35 (60%)
WD40 repeat 420..456 CDD:293791 24/35 (69%)
WD40 repeat 462..486 CDD:293791 16/23 (70%)
W07E6.2NP_493745.1 NLE 7..70 CDD:369718 22/62 (35%)
WD40 97..430 CDD:238121 186/337 (55%)
WD40 repeat 110..145 CDD:293791 21/34 (62%)
WD40 repeat 150..188 CDD:293791 19/37 (51%)
WD40 repeat 194..235 CDD:293791 18/40 (45%)
WD40 repeat 240..275 CDD:293791 24/34 (71%)
WD40 repeat 282..356 CDD:293791 32/78 (41%)
WD40 repeat 363..399 CDD:293791 21/35 (60%)
WD40 repeat 405..441 CDD:293791 24/35 (69%)
WD40 433..471 CDD:197651 25/37 (68%)
WD40 repeat 447..471 CDD:293791 16/23 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158299
Domainoid 1 1.000 77 1.000 Domainoid score I5746
eggNOG 1 0.900 - - E1_KOG0271
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5494
Inparanoid 1 1.050 508 1.000 Inparanoid score I718
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53974
OrthoDB 1 1.010 - - D346056at33208
OrthoFinder 1 1.000 - - FOG0005114
OrthoInspector 1 1.000 - - oto19852
orthoMCL 1 0.900 - - OOG6_101916
Panther 1 1.100 - - LDO PTHR19848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R814
SonicParanoid 1 1.000 - - X3634
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.840

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