DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11835 and CX3CL1

DIOPT Version :9

Sequence 1:NP_001259835.1 Gene:CG11835 / 33232 FlyBaseID:FBgn0031264 Length:795 Species:Drosophila melanogaster
Sequence 2:NP_002987.1 Gene:CX3CL1 / 6376 HGNCID:10647 Length:397 Species:Homo sapiens


Alignment Length:336 Identity:77/336 - (22%)
Similarity:115/336 - (34%) Gaps:99/336 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 PKPAETKSTDQKVEPKSA---------EKQVDKAKPIEQTKTKESKVEHPKPAQKQLDQNTQAKP 343
            ||....|...|.::.::|         |||:.:.||            ...||...:|::...:|
Human    77 PKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKP------------RTTPAAGGMDESVVLEP 129

  Fly   344 TAERSEAKPVVPTPEPQKSAPPAVQTLAQIVALPAEKPANEAVAAPKAEEQKKDSSGPAKVEPAI 408
            .| ..|:..:.|||..|:    |.:.|.....||.....:.....|..  .|....||...|...
Human   130 EA-TGESSSLEPTPSSQE----AQRALGTSPELPTGVTGSSGTRLPPT--PKAQDGGPVGTELFR 187

  Fly   409 TPSAPQPVTTAEPPKSALKQDSPPKSAPKQGSPPKNVPKQESPPQSAPKQDSPPKGAPKQDSPPK 473
            .|    ||:||...:|         |||.|..|..   ..|:....||....|...|....||  
Human   188 VP----PVSTAATWQS---------SAPHQPGPSL---WAEAKTSEAPSTQDPSTQASTASSP-- 234

  Fly   474 GAPKQDSPPKG--------APKQDSAPQQKTPPPVKQEVAPAKQDEPPAKQDAPPAKQDAPVPVP 530
             ||::::|.:|        :|:.:::.:::...||     ||..|   |.||..|.         
Human   235 -APEENAPSEGQRVWGQGQSPRPENSLEREEMGPV-----PAHTD---AFQDWGPG--------- 281

  Fly   531 EVIKTLAPEVPNVSQAPAQPQGQAALASEKPADAPKAIEEPKAA----PKKESP--PPTKPVTAT 589
                    .:.:||..|...:|..:             .||.|:    ||.|.|  ....|....
Human   282 --------SMAHVSVVPVSSEGTPS-------------REPVASGSWTPKAEEPIHATMDPQRLG 325

  Fly   590 VPVAPATPAEA 600
            |.:.|...|:|
Human   326 VLITPVPDAQA 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11835NP_001259835.1 NAC 38..91 CDD:280093
CX3CL1NP_002987.1 Chemokine_CX3C 25..100 CDD:238172 5/22 (23%)
Chemokine and involved in interaction with ITGAV:ITGB3 and ITGA4:ITGB1. /evidence=ECO:0000269|PubMed:23125415 25..100 5/22 (23%)
Mucin-like stalk 101..341 72/312 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 39/162 (24%)
dnaA 131..>324 CDD:333091 59/256 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 289..309 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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