DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11835 and dao-5

DIOPT Version :9

Sequence 1:NP_001259835.1 Gene:CG11835 / 33232 FlyBaseID:FBgn0031264 Length:795 Species:Drosophila melanogaster
Sequence 2:NP_001021004.1 Gene:dao-5 / 266845 WormBaseID:WBGene00000931 Length:971 Species:Caenorhabditis elegans


Alignment Length:868 Identity:208/868 - (23%)
Similarity:318/868 - (36%) Gaps:197/868 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KKLQSSLKKLSVSTIPGIEEVNIIKDDLTVIHFNNPKAQASLSANTFAV-------------TGH 88
            |||.:.||.         .|...:||.:|...|...|..||.|.|...|             :..
 Worm    33 KKLDAFLKD---------NEAPKLKDIVTDNVFKKRKRIASSSGNEPPVKKMAAKDSSDSDSSDD 88

  Fly    89 GETRKVVEMLPDILPQLGQETVVQLRMYANAMNSQKGAPGSGDGPLPAEEDDDVPLLVGDFDEVA 153
            |..:|           .|.:..|.:....:|...||.|..|      :..|.|.|        ..
 Worm    89 GAVKK-----------NGVQKPVNVAAKKSATPVQKKAESS------SSSDSDAP--------AK 128

  Fly   154 KVEATKQPVHEP--KESAEIKAKDKQQQQPKKEQKQSAKV-------PETTNPSENPKEKQENKK 209
            |:...|:|...|  |::|.....|...:.|||....:.||       .:.|:.|::..|..::.|
 Worm   129 KLTPVKKPAQTPAQKKAASSSDSDSDDEPPKKAPAVTTKVAPKPMAKKQDTSDSDSDSEDSDDGK 193

  Fly   210 GQAKNNKKGDPQTN-------KDKTNKSKDQAKGQPAPQANKETTQAAQALKQNPSKPAVQQKKD 267
            .:..|..|..|..|       |...:.|.|.:..:..|           |.|..|:||..:    
 Worm   194 SKKANPVKVTPVANVLQKVVAKKAASSSSDSSDDEKKP-----------AAKPTPAKPTPK---- 243

  Fly   268 QVLAVDQKIEANGAI---QKAQQPKPAETKSTDQKVEPKSAEKQVDKAK-------PIEQTKTKE 322
               .|.:|.|::...   :|....|||..|:|     ||.|.|:.|.:.       |.::|..|.
 Worm   244 ---PVVKKAESSSDSSDDEKKPVAKPAPAKAT-----PKPAAKKADSSSDSSDDEAPAKKTPAKA 300

  Fly   323 SKVEHPKPAQKQLDQNTQAKPTAERSEAKPVVPTPEPQKSAPPAVQTLAQIVA-------LPAEK 380
            :    |||..|:.:.::.:....::..|||.     |.|:.|..|...|:..:       .|..|
 Worm   301 A----PKPVAKKAESSSDSSDDEKKPAAKPT-----PAKATPKPVAKKAESSSDSSDDEKKPVAK 356

  Fly   381 PANEAVAAPKAEEQKKDSSGPA---KVEPAITP----SAPQPVT-TAEPPKSALKQDSPPKSAPK 437
            || .|.|.||...:|.:||..:   :.:||..|    :.|:||. .||....:...:..|.:.|.
 Worm   357 PA-PAKATPKPVAKKAESSSDSSDDEKKPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVAKPT 420

  Fly   438 QG-SPPKNVPKQ-----ESPPQSAPKQDSPPKGAPKQDSPPKGAPKQDSPPKGAPKQDSAPQQKT 496
            .. :.||...|:     :|....||.:.:|.|.|||..| .|.....||.....|...|.|.:.|
 Worm   421 SAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKPAS-KKAESSSDSSDDEKPAAKSTPAKIT 484

  Fly   497 PPPVKQEVAPAKQD------EPPAKQDAPPAKQDAPVPVPEVIKTLAPEVPNVSQAPAQPQGQAA 555
            |.|..::||.:..|      :|.||   |......|.||.:..::.:....:..:..|:|  .:|
 Worm   485 PKPTAKKVASSSSDSSDDEKKPAAK---PTPANATPKPVAKKAESSSDSSDDEKKPVAKP--TSA 544

  Fly   556 LASEKPA-------------DAPKAIEEPKAAPKKESPPPTKPVTAT-------VPVAPATPAE- 599
            .|:.|||             :||......|||||    |.:|...::       .|.|.:|||: 
 Worm   545 KATPKPAAKKADLSSDFSDDEAPAKKTPAKAAPK----PASKKAESSSDSSDDEKPAAKSTPAKT 605

  Fly   600 APSPLAPSTPPSTPTSVPPSAATVTPPSPATVTPPSPAVVTPPQKQSAAPQAGIKK--------- 655
            .|.|.|.....|:..|.......|..|:.|..||...|........|:..:|..||         
 Worm   606 TPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDDEAPAKKTPVKPTPVK 670

  Fly   656 ---QEAGTKTKQQQPANKPQQ--PQKQPPGGA--GGSAGPGGNKGVQKQPNPNAKPAVAPKPAQA 713
               ::..:.:.......||.:  |.|..|...  ..:|....:...:|:|.....|.|.||..:|
 Worm   671 IVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEKKPVVKQTPNVVPKKEKA 735

  Fly   714 T----------PKPAA-ASPKASPNQ------TNPQQQQGKAANKASPPKQTGPTGGQQKSAANA 761
            .          .||.| .:|||:|.|      ::......:|..|.:|.|.|......:|.|:::
 Worm   736 ASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSDDEAPAKKTPAKSTPAKTAVKKEASSS 800

  Fly   762 SKATASPKSAASPKATSPKAGTP 784
            |..::..:......||:|...||
 Worm   801 SDDSSDDEKTKKKSATTPAKSTP 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11835NP_001259835.1 NAC 38..91 CDD:280093 16/65 (25%)
dao-5NP_001021004.1 tRNA-synt_1g <196..321 CDD:330949 34/151 (23%)
DNA_pol3_gamma3 <262..457 CDD:331207 56/209 (27%)
DNA_pol3_gamma3 <389..606 CDD:331207 59/226 (26%)
Atrophin-1 <445..886 CDD:331285 96/389 (25%)
SRP40_C 897..>945 CDD:309939
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.759104 Normalized mean entropy S2165
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.950

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