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Protein Alignment Tspo and tspo-1
DIOPT Version :9
Sequence 1: | NP_608531.1 |
Gene: | Tspo / 33231 |
FlyBaseID: | FBgn0031263 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001251116.1 |
Gene: | tspo-1 / 7040157 |
WormBaseID: | WBGene00077771 |
Length: | 212 |
Species: | Caenorhabditis elegans |
Alignment Length: | 140 |
Identity: | 52/140 - (37%) |
Similarity: | 77/140 - (55%) |
Gaps: | 16/140 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 QHLQSWYANLKFPSFKPPN-SVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLA 96
|.:..|:|.||.|::.|.: .|::.:.:...:.:||.||||:::||||.....||.|..||..:.
Worm 75 QQVADWWAALKKPNWAPKDVRVYSAVDLLTLSPLGYASYLVYKNGGGFDYNDTKLALGLYGASVT 139
Fly 97 LNWAWTPIFFGQHNIK----GGL---IDIVALTAAASACGVLFYRVNKTAGLLFVPYVAWLGFAT 154
|..|..|| :| |.| ..:|:|||||:: ..||:::|.||||.||:..|..|..
Worm 140 LAVATIPI------VKKKELGCLWKNTTVVSLTAAAAS--FAFYKIDKKAGLLVVPFAVWTAFYA 196
Fly 155 ALNYAIWKLN 164
.|.|:|.|.|
Worm 197 YLAYSIKKEN 206
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160167238 |
Domainoid |
1 |
1.000 |
76 |
1.000 |
Domainoid score |
I5855 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
78 |
1.000 |
Inparanoid score |
I3821 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1592225at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003750 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto20068 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_102539 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10057 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1562 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
12 | 11.930 |
|
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