Sequence 1: | NP_995608.1 | Gene: | rempA / 33230 | FlyBaseID: | FBgn0260933 | Length: | 1503 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_055529.2 | Gene: | IFT140 / 9742 | HGNCID: | 29077 | Length: | 1462 | Species: | Homo sapiens |
Alignment Length: | 1502 | Identity: | 503/1502 - (33%) |
---|---|---|---|
Similarity: | 793/1502 - (52%) | Gaps: | 174/1502 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTLYFDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGE--PQRDVTYPVHAT 63
Fly 64 SQATALCWHPEKALLASGWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRMVTADAMGL 128
Fly 129 VTGWRCD--GQYQFLTMFSHDLREVLLLICFRLTVESEVREEMANLAKAAVAGDENALDTLTNWR 191
Fly 192 PRTAARSMTHSGVRDNHCFYACTQGGVVYYINQGGACVEVMKCGSLPPIVQMLWH-PRKDAVICL 255
Fly 256 MEDLTVTLFLVESTGILTELDRVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWDIERSDNYLL 320
Fly 321 KMDLPSGNQPGSSMTTLSNGTMSSSNQFFSHDSSESSGVLRKTPKYGQLNGEMFTCLAYSSTGQT 385
Fly 386 LCAGTSQGNVYTWKRSGSRLVGAP----EDAWQLTNISSVRGAIRSCEWGYNELAKPCMLVNCLS 446
Fly 447 NVFMLKEQPLLAVHTRELWAVQRSAKSVQLTHCS-GREAIVQSEFAVTAMALSELSLVMSNGRSI 510
Fly 511 SSYSLQKVEKSLDEFEEILQTVEGTTPTTESTTTPLSLKLLQTFAAECLALNLCNQNIFCLGSSD 575
Fly 576 VFVYSVGGVVLHRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIF 640
Fly 641 DDFGEFILVKCNSSGSHLAMVIASSNFTPISTLFCWDFE---------------RSNLLEYGLLE 690
Fly 691 PETN-----AKKESSTSLPVRIFWDAEEPRLLATEVKSMIQKTLPQKNSLQP------------- 737
Fly 738 ----------------------SHFVQSKVVLLFYSEKGCLNVLETQSMSPGCQLLNLCVPNVIR 780
Fly 781 LKINTMEEQPLQDFVDLQQCNPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMCVH 845
Fly 846 TNRLDVAKVCMGHLEQARSVRALRQAIEDDDLETEAKVAVLAIELGMIEEAKDLYRRCKRFDLLN 910
Fly 911 KLLQSIGHLDEAVELAEAEDRIHLKHTYYQKAQELRERGDIKGALEYFEKTQNPAQNITQLLLEN 975
Fly 976 PGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKADAIARQ 1040
Fly 1041 SGDRAACYHLARHYENVGKFQEAIMFFTRAQTFSNAIRICKENDFQEELWTVASSSRQRDKAIAA 1105
Fly 1106 AYFEECG-NFKHAVELYHRAGMLHKALEMAFESQQPEILEIIASDLAPDSDAELINRCADFFCSI 1169
Fly 1170 EQFQKAVHLLAKTRHLERALGICSEKGVPVTEELSEMLTPEK--GEFEEATRVHILVQLGEFLQQ 1232
Fly 1233 QGDYHSATKKFTQAGDKIRAMKSLLKSGNTDKIIFFANMSRQREVYIMAANYLQALDWQSDPQVL 1297
Fly 1298 KHIVTFYTKGQAFDSLANFYAICAQIEIEEFQDYGKALTAMQEASKCLEKLSHAQHV-----YNN 1357
Fly 1358 LQRTVADVKAILEIQQALREGDHQLVIGSCRSMLIKPEL-PPIRHAHILAMLIRALVYVKDYSEA 1421
Fly 1422 GRALKEL 1428 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rempA | NP_995608.1 | WD40 | <14..123 | CDD:295369 | 38/110 (35%) |
WD40 repeat | 67..103 | CDD:293791 | 13/35 (37%) | ||
WD40 | 71..480 | CDD:225201 | 113/415 (27%) | ||
WD40 repeat | 108..144 | CDD:293791 | 11/37 (30%) | ||
WD40 repeat | 153..202 | CDD:293791 | 19/48 (40%) | ||
WD40 repeat | 222..276 | CDD:293791 | 13/54 (24%) | ||
WD40 repeat | 288..312 | CDD:293791 | 5/23 (22%) | ||
TPR | 860..1070 | CDD:223533 | 94/209 (45%) | ||
BRO1_Alix_like | <901..1110 | CDD:301330 | 91/208 (44%) | ||
TPR repeat | 937..973 | CDD:276809 | 10/35 (29%) | ||
TPR repeat | 988..1039 | CDD:276809 | 26/50 (52%) | ||
TPR repeat | 1044..1070 | CDD:276809 | 12/25 (48%) | ||
IFT140 | NP_055529.2 | WD 1 | 4..48 | 18/43 (42%) | |
WD40 | <19..121 | CDD:330360 | 38/105 (36%) | ||
WD40 repeat | 19..59 | CDD:293791 | 16/39 (41%) | ||
WD 2 | 51..90 | 17/42 (40%) | |||
WD40 repeat | 65..101 | CDD:293791 | 14/39 (36%) | ||
WD 3 | 93..132 | 10/38 (26%) | |||
WD40 | 102..434 | CDD:225201 | 102/383 (27%) | ||
WD40 repeat | 106..144 | CDD:293791 | 11/37 (30%) | ||
WD 4 | 139..188 | 21/53 (40%) | |||
WD40 repeat | 152..197 | CDD:293791 | 20/49 (41%) | ||
WD40 repeat | 204..258 | CDD:293791 | 14/56 (25%) | ||
WD 5 | 221..259 | 10/40 (25%) | |||
WD 6 | 266..305 | 12/38 (32%) | |||
WD40 repeat | 268..320 | CDD:293791 | 20/91 (22%) | ||
WD 7 | 322..361 | 12/39 (31%) | |||
WD40 repeat | 327..351 | CDD:293791 | 8/23 (35%) | ||
TPR 1 | 772..807 | 15/34 (44%) | |||
TPR 2 | 869..904 | 18/34 (53%) | |||
TPR 3 | 906..934 | 8/27 (30%) | |||
TPR_11 | <951..1233 | CDD:330823 | 130/281 (46%) | ||
TPR 4 | 955..988 | 18/32 (56%) | |||
TPR repeat | 957..983 | CDD:276809 | 15/25 (60%) | ||
TPR 5 | 1010..1043 | 17/32 (53%) | |||
TPR repeat | 1010..1036 | CDD:276809 | 12/25 (48%) | ||
TPR 6 | 1078..1111 | 16/32 (50%) | |||
TPR 7 | 1123..1156 | 12/32 (38%) | |||
TPR 8 | 1189..1222 | 15/32 (47%) | |||
TPR 9 | 1376..1409 | 7/27 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1434..1462 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165147339 | |
Domainoid | 1 | 1.000 | 786 | 1.000 | Domainoid score | I75 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3617 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H40979 | |
Inparanoid | 1 | 1.050 | 800 | 1.000 | Inparanoid score | I509 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG56666 | |
OrthoDB | 1 | 1.010 | - | - | D149441at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005776 | |
OrthoInspector | 1 | 1.000 | - | - | oto89663 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104215 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15722 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4754 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.770 |