Sequence 1: | NP_995608.1 | Gene: | rempA / 33230 | FlyBaseID: | FBgn0260933 | Length: | 1503 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_598887.3 | Gene: | Ift140 / 106633 | MGIID: | 2146906 | Length: | 1464 | Species: | Mus musculus |
Alignment Length: | 1514 | Identity: | 515/1514 - (34%) |
---|---|---|---|
Similarity: | 813/1514 - (53%) | Gaps: | 151/1514 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTLYFDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSQ 65
Fly 66 ATALCWHPEKALLASGWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRMVTADAMGLVT 130
Fly 131 GWRCD--GQYQFLTMFSHDLREVLLLICFRLTVESEVREEMANLAKAAVAGDENALDTLTNWRPR 193
Fly 194 TAARSMTHSGVRDNHCFYACTQGGVVYYINQGGACVEVMKCGSLPPIVQMLWH-PRKDAVICLME 257
Fly 258 DLTVTLFLVESTGILTELDRVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWDIERSDNYLLKM 322
Fly 323 DLPSGNQPGSSMTTLSNGTMSSSNQFFSHDSSESSGVLRKTPKYGQLNGEMFTCLAYSSTGQTLC 387
Fly 388 AGTSQGNVYTWKR-----SGSRLVGAPEDAWQLTNISSVRGAIRSCEWGYNELAKPCMLVNCLSN 447
Fly 448 VFMLKEQPLLAVHTRELWAVQRSAKSVQLTHCS-GREAIVQSEFAVTAMALSELSLVMSNGRSIS 511
Fly 512 SYSLQKVEKSLDEFEEILQTVEGTTPTTESTTTPLSLKLLQTFAAECLALNLCNQNIFCLGSSDV 576
Fly 577 FVYSVGGVVLHRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIFD 641
Fly 642 DFGEFILVKCNSSGSHLAMVIASSNFTPISTLFCWDFERSNLLEYGLL-------------EPET 693
Fly 694 N-----AKKESSTSLPVRIFWDAEEPRLLATEVKSMIQKTLPQKNSLQP------SHFVQSKVVL 747
Fly 748 LFYSEK-GCLNVLETQSMSPGC--QLLNLCVPNVIRLK------------------INTMEEQPL 791
Fly 792 QDFVDLQQCNPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMCVHTNRLDVAKVCM 856
Fly 857 GHLEQARSVRALRQAIEDDDLETEAKVAVLAIELGMIEEAKDLYRRCKRFDLLNKLLQSIGHLDE 921
Fly 922 AVELAEAEDRIHLKHTYYQKAQELRERGDIKGALEYFEKTQNPAQNITQLLLENPGAMKRYIQTT 986
Fly 987 SDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKADAIARQSGDRAACYHLA 1051
Fly 1052 RHYENVGKFQEAIMFFTRAQTFSNAIRICKENDFQEELWTVASSSRQRDKAIAAAYFEECG-NFK 1115
Fly 1116 HAVELYHRAGMLHKALEMAFESQQPEILEIIASDLAPDSDAELINRCADFFCSIEQFQKAVHLLA 1180
Fly 1181 KTRHLERALGICSEKGVPVTEELSEMLTPEKG--EFEEATRVHILVQLGEFLQQQGDYHSATKKF 1243
Fly 1244 TQAGDKIRAMKSLLKSGNTDKIIFFANMSRQREVYIMAANYLQALDWQSDPQVLKHIVTFYTKGQ 1308
Fly 1309 AFDSLANFYAICAQIEIEEFQDYGKALTAMQEASKCLEKLS-----HAQHVYNNLQRTVADVKAI 1368
Fly 1369 LEIQQALREGDHQLVIGSCRSMLIKPEL-PPIRHAHILAMLIRALVYVKDYSEAGRALKELTVKD 1432
Fly 1433 STWSASGLLDRSIVHKIAQ 1451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rempA | NP_995608.1 | WD40 | <14..123 | CDD:295369 | 41/108 (38%) |
WD40 repeat | 67..103 | CDD:293791 | 14/35 (40%) | ||
WD40 | 71..480 | CDD:225201 | 115/416 (28%) | ||
WD40 repeat | 108..144 | CDD:293791 | 12/37 (32%) | ||
WD40 repeat | 153..202 | CDD:293791 | 20/48 (42%) | ||
WD40 repeat | 222..276 | CDD:293791 | 13/54 (24%) | ||
WD40 repeat | 288..312 | CDD:293791 | 5/23 (22%) | ||
TPR | 860..1070 | CDD:223533 | 96/209 (46%) | ||
BRO1_Alix_like | <901..1110 | CDD:301330 | 92/208 (44%) | ||
TPR repeat | 937..973 | CDD:276809 | 11/35 (31%) | ||
TPR repeat | 988..1039 | CDD:276809 | 25/50 (50%) | ||
TPR repeat | 1044..1070 | CDD:276809 | 12/25 (48%) | ||
Ift140 | NP_598887.3 | WD 1 | 4..48 | 19/43 (44%) | |
WD40 | <13..>147 | CDD:225201 | 49/135 (36%) | ||
WD40 repeat | 19..57 | CDD:293791 | 18/39 (46%) | ||
WD 2 | 51..90 | 17/40 (43%) | |||
WD40 repeat | 64..101 | CDD:293791 | 15/36 (42%) | ||
WD40 | 86..437 | CDD:225201 | 108/403 (27%) | ||
WD 3 | 93..132 | 12/38 (32%) | |||
WD40 repeat | 108..160 | CDD:293791 | 15/51 (29%) | ||
WD 4 | 139..188 | 22/53 (42%) | |||
WD 5 | 221..259 | 10/40 (25%) | |||
WD 6 | 266..305 | 12/38 (32%) | |||
WD 7 | 322..361 | 11/38 (29%) | |||
TPR 1. /evidence=ECO:0000255 | 772..808 | 16/35 (46%) | |||
TPR | 832..1092 | CDD:223533 | 122/261 (47%) | ||
TPR 2. /evidence=ECO:0000255 | 863..896 | 17/32 (53%) | |||
TPR 3. /evidence=ECO:0000255 | 902..935 | 11/32 (34%) | |||
TPR 4. /evidence=ECO:0000255 | 956..989 | 16/32 (50%) | |||
TPR 5. /evidence=ECO:0000255 | 1011..1044 | 17/32 (53%) | |||
Nic96 | <1047..1228 | CDD:367811 | 77/180 (43%) | ||
TPR 6. /evidence=ECO:0000255 | 1079..1112 | 16/32 (50%) | |||
TPR 7. /evidence=ECO:0000255 | 1124..1157 | 12/32 (38%) | |||
TPR 8. /evidence=ECO:0000255 | 1190..1223 | 15/32 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167837272 | |
Domainoid | 1 | 1.000 | 822 | 1.000 | Domainoid score | I62 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3617 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H40979 | |
Inparanoid | 1 | 1.050 | 822 | 1.000 | Inparanoid score | I467 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG56666 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0005776 | |
OrthoInspector | 1 | 1.000 | - | - | oto93230 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104215 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15722 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3605 |
SonicParanoid | 1 | 1.000 | - | - | X4754 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.790 |