DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets21C and Elk3

DIOPT Version :9

Sequence 1:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001102213.1 Gene:Elk3 / 362871 RGDID:1307764 Length:408 Species:Rattus norvegicus


Alignment Length:292 Identity:86/292 - (29%)
Similarity:116/292 - (39%) Gaps:84/292 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 IQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAKPNMNYDKLSRALRYYYDK 319
            |.||||||.||.|..:.:.|.|....|||:|:..:|||:.||.||.|.|||||||||||||||||
  Rat     5 ITLWQFLLHLLLDQKHEHLICWTSNDGEFKLLKAEEVAKLWGLRKNKTNMNYDKLSRALRYYYDK 69

  Fly   320 NIMTKVHGKRYAYKF---------DFHGLMAA----------CQAQAQGGDPASSMLGS------ 359
            ||:.||.|:::.|||         |.|.:..:          |:...:|.:.....|.|      
  Rat    70 NIIKKVIGQKFVYKFVSFPDILKMDPHAVEISRESLLLQDSDCKVSPEGREIHKHGLSSLKSASR 134

  Fly   360 --YNH----------------HAGGAMQLGRHPPPLHHHPQHSHPHHQL----------GQPHFL 396
              |.|                .|..|::..:...|....|    |..::          ...|..
  Rat   135 NEYIHSGLYSSFTINSLQNAPEAFKAIKTEKLEEPCDDSP----PVEEVRTVIRFVTNKTDKHIT 195

  Fly   397 HPHHSSPASNS-----------------SSLGFP-----SSSTASSQASPGQAPAS--SSASTSN 437
            .|..|.|:::.                 |||..|     ||::.||..||..:|.|  .|...|.
  Rat   196 RPVVSLPSTSEAAAAASAFLASSVSAKISSLMLPNAASVSSASPSSSRSPSLSPNSPLPSEHRSL 260

  Fly   438 FTAPFQGGTAGVDPARTSTSSAGNYDQGPVTP 469
            |   .:......|.......|:|:..:.|..|
  Rat   261 F---LEAACHDADSLEPLNLSSGSKTKSPSLP 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876
ETS 254..339 CDD:197710 51/92 (55%)
Elk3NP_001102213.1 ETS 5..89 CDD:197710 49/83 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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