DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets21C and Elk4

DIOPT Version :9

Sequence 1:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_008767689.1 Gene:Elk4 / 304786 RGDID:1310504 Length:437 Species:Rattus norvegicus


Alignment Length:254 Identity:84/254 - (33%)
Similarity:116/254 - (45%) Gaps:39/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 RLVAQGSGGQIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAKPNMNYDKL 309
            |.:|..|.  |.||||||:||.:..|.:.|.|...:|||:|:..:||||.||.||.|||||||||
  Rat     4 RPIAMDSA--ITLWQFLLQLLQEPQNEHVICWTSNNGEFKLLQAEEVARLWGIRKNKPNMNYDKL 66

  Fly   310 SRALRYYYDKNIMTKVHGKRYAYKFDFHGLMAACQAQAQG---GD-------PASSMLGSYNHHA 364
            ||||||||.|||:.||:|:::.|||..:..:........|   ||       .|||   |.:...
  Rat    67 SRALRYYYVKNIIKKVNGQKFVYKFVSYPEILKMDPLTVGRIEGDCETLNSIEASS---SKDAEC 128

  Fly   365 GGAMQLGRHPPP-LHHHPQHSHPHHQLGQPHFLHPHHSSPAS--NSSSLGFPSSSTASSQA---- 422
            ||.   .|.|.| .....::.:.|..|.....|:..::|...  .|..:..|:...|..:|    
  Rat   129 GGK---ERPPQPGAKTSSRNDYIHSGLYSSFTLNSLNTSNKKLFKSIKIENPAEKLAEKKAQEPT 190

  Fly   423 --------SPGQAPASSSASTSNFTAPFQGGTAGVDPARTSTSSAGNYDQGPVTPTTNA 473
                    :|.:.|.....:.:..|:|      .|.|:...|..|......|..|:..|
  Rat   191 PSVIKFVTTPAKKPPMEPVTVAFSTSP------SVSPSSEETIQALETLVSPTLPSLEA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876
ETS 254..339 CDD:197710 50/84 (60%)
Elk4XP_008767689.1 ETS 24..95 CDD:197710 41/70 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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