DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets21C and lin-1

DIOPT Version :9

Sequence 1:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001023051.1 Gene:lin-1 / 177016 WormBaseID:WBGene00002990 Length:441 Species:Caenorhabditis elegans


Alignment Length:248 Identity:90/248 - (36%)
Similarity:116/248 - (46%) Gaps:48/248 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 IQLWQFLLELLADSSNANAISW-EGQSGEFRLIDPDEVARRWGERKAKPNMNYDKLSRALRYYYD 318
            |.|||||||||....|.:.|.| .|..|||||||.:.|||:||:|||||:||||||||||||||:
 Worm    64 ITLWQFLLELLQQDQNGDIIEWTRGTDGEFRLIDAEAVARKWGQRKAKPHMNYDKLSRALRYYYE 128

  Fly   319 KNIMTKVHGKRYAYKF---DFHGLMAACQAQAQGGDPASSMLGSYN-------------HHAGGA 367
            |||:.||.||::.|:|   |.|            ..|.:....:.|             |.....
 Worm   129 KNIIKKVIGKKFVYRFVTTDAH------------APPTADFSSNMNMKMCYVKDEKDIRHEIPSF 181

  Fly   368 MQLGRHPPPLHHHPQHSHPHHQLGQPHFL-----HPHHSSPASNSSSLGFPSSSTASSQASPGQA 427
            |...:.|||....||:...:........|     ..|..|..|.:.|:..||||.|||......:
 Worm   182 MTSLQAPPPPPPPPQNPRGNTDFSALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSS 246

  Fly   428 PASSS----------ASTSNFTA---PFQGGT-AGVDPARTSTSSAGNYDQGP 466
            |...|          ::||:.||   |.|..| .|:.|...:.::..|:...|
 Worm   247 PVDESRQCRKRSLSPSTTSSTTAPPPPPQPPTKKGMKPNPLNLTATSNFSLQP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876
ETS 254..339 CDD:197710 56/87 (64%)
lin-1NP_001023051.1 ETS 64..145 CDD:197710 53/80 (66%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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