DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ets21C and ets2

DIOPT Version :9

Sequence 1:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001120533.1 Gene:ets2 / 100145687 XenbaseID:XB-GENE-6084129 Length:471 Species:Xenopus tropicalis


Alignment Length:497 Identity:126/497 - (25%)
Similarity:158/497 - (31%) Gaps:208/497 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QQRPINAMHQDVRQKSIGSGNETKLEAKETEVPTNRRRRRRRCSSSSTSDSSASSYSS-----TD 86
            |..|:...|:.:.::.....|        ..|||            |......|:|..     |.
 Frog    11 QVAPVYNGHRGMLKRQFAFDN--------VSVPT------------SLYSGLFSAYEEEQAVPTG 55

  Fly    87 SDSGSSTSSSSIRSQLPALNLPVPLPLATPTPPAVSSPHQAPSPRRNSSDSNRSVSPVEVPVDPH 151
            .||.|..|||            ..|||.||...||.|  ||.....|.....|  ..:.:|.:|.
 Frog    56 LDSYSHDSSS------------CELPLLTPCSKAVMS--QALKDTFNGFTKER--CRLCIPGNPW 104

  Fly   152 AWTPEDIASWVRWATRKFKLDPEPDIDRFPKDAQELCDLSRADF--------------------- 195
            .|....:..|:.||.::|.|: ..:..:|..:..|||.|.:..|                     
 Frog   105 LWDENHVFQWLLWAAKEFSLE-NVNFQKFLMNGHELCSLGKERFLALAPDFVGDILWEHLEEMMK 168

  Fly   196 ---------------------WV------------------------------------------ 197
                                 |:                                          
 Frog   169 EHQVKAQESYIDHSNRDSVNQWMNADSLNFPADPLQCGAQVHNYPKNGMFNDMCSVPTGQPLLTP 233

  Fly   198 ----------CAGSRRGGMLLAQHFAISLYHA-----------------TGRE----TSPMLN-- 229
                      |..||......:|.||.|..:|                 :|.|    |..||.  
 Frog   234 KQEFQQYPSSCLKSRAVNYPPSQDFARSNMNALLSSLNSGKLRDYDSGDSGTESFESTESMLQSW 298

  Fly   230 ---------------------------------------DDEPNPYQLLNAASHRLVAQG--SGG 253
                                                   .|...|.:|........:..|  ..|
 Frog   299 TSQSSLVDMQRVPSYDSFEEDGSQALCLNKPPMSFKDYIQDRCEPAELGKPVIPASILAGFTGSG 363

  Fly   254 QIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAKPNMNYDKLSRALRYYYD 318
            .|||||||||||.|.|..:.|||.|...||:|.||||||||||:||.||.|||:||||.||||||
 Frog   364 PIQLWQFLLELLTDKSCQSFISWTGDGWEFKLTDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYD 428

  Fly   319 KNIMTKVHGKRYAYKF--DFHGLMAACQAQAQGGDPASSMLG 358
            |||:.|..||||.|:|  |.|.|:....      |...:|||
 Frog   429 KNIIHKTSGKRYVYRFVCDLHNLLGYTP------DELHAMLG 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876 21/161 (13%)
ETS 254..339 CDD:197710 59/86 (69%)
ets2NP_001120533.1 SAM_superfamily 85..173 CDD:301707 16/90 (18%)
ETS 364..449 CDD:197710 58/84 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.