DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets21C and gabpa

DIOPT Version :9

Sequence 1:NP_001285547.1 Gene:Ets21C / 33229 FlyBaseID:FBgn0005660 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001116494.1 Gene:gabpa / 100126064 XenbaseID:XB-GENE-987250 Length:454 Species:Xenopus tropicalis


Alignment Length:403 Identity:117/403 - (29%)
Similarity:162/403 - (40%) Gaps:111/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CSSSSTSDSSASSYSSTDSDSGSSTSSSSIRSQL---PALNL-----PVPLPLATPTPPA----- 120
            |......|...|.:.......||...|..:.||.   |.||:     ||........|.|     
 Frog    69 CLQDIQLDPDRSLFDQGVKTDGSVQLSVQVISQQGLEPKLNILEIVKPVETVEVVIDPDAHQDAV 133

  Fly   121 -------------VSSPHQAPSPRRNSSDSNRSVSPVE----------VPVDPHAWTPEDIASWV 162
                         ..|.|........|....|..:.:|          :|.||..|:.:.:..||
 Frog   134 EAELVEEAQVITLDGSKHITTMSDETSEQVTRWAAALEGYRKEQERLGIPYDPLQWSVDQVLHWV 198

  Fly   163 RWATRKFKLDPEPDIDRFPKDAQELCDLSRADFWVCAGSR--RGGM------LLAQHFAISLYHA 219
            .|..::|.| .|.:::......:|||:|::.||:    .|  ||.:      ||.::...|..| 
 Frog   199 LWVMKEFCL-TEINVNSLGITGRELCNLNQEDFF----QRVPRGEILWSHLELLRKYVLASQEH- 257

  Fly   220 TGRETSPMLNDDEPNPYQLLNAA-------------SHRLVAQ-------------------GSG 252
             |.|.:.:..|   .|.|::.|:             |...||:                   |:.
 Frog   258 -GGEIATVTID---QPVQIIPASIQPTAQTTIKVINSQTKVAKIQRTPRISGEDRSSPGNRTGNN 318

  Fly   253 GQIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAKPNMNYDKLSRALRYYY 317
            |||||||||||||.|....:.|||.|..|||:|..|:.||::||:||.||.|||:||||||||||
 Frog   319 GQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 383

  Fly   318 DKNIMTKVHGKRYAYKF--DFHGLMAACQAQAQGGDPASSMLGSYNHHAGGAMQLGRHPPPLHHH 380
            |.:::.||.|||:.|||  |...|:....|:      .|.::..........|||          
 Frog   384 DGDMICKVQGKRFVYKFVCDLKTLIGYSAAE------LSRLVAECEQKKMAKMQL---------- 432

  Fly   381 PQHSHPHHQLGQP 393
                   |.:|||
 Frog   433 -------HGIGQP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets21CNP_001285547.1 SAM_PNT 149..217 CDD:188876 21/75 (28%)
ETS 254..339 CDD:197710 53/86 (62%)
gabpaNP_001116494.1 GABP-alpha 40..119 CDD:371630 13/49 (27%)
SAM_PNT-GABP-alpha 168..254 CDD:176084 22/90 (24%)
ETS 320..404 CDD:197710 52/83 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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