Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_006019.1 | Gene: | HTR3B / 9177 | HGNCID: | 5298 | Length: | 441 | Species: | Homo sapiens |
Alignment Length: | 480 | Identity: | 111/480 - (23%) |
---|---|---|---|
Similarity: | 186/480 - (38%) | Gaps: | 103/480 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 LLQMLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGT-PTNVSLEMV 82
Fly 83 V-TYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLM 146
Fly 147 AE----------TQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVLPEN 201
Fly 202 GTARG-ESLDHDD--LVQSPEWEIVDSRAHFVSQDY---------YGYMEYTLTAQRRSSMYTAV 254
Fly 255 IYTPASCIVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTS 319
Fly 320 LLYLSVSTIVE-VLVLYL-----------------ATGKHKRRL-PEALRKL-----LHG-HL-- 357
Fly 358 -GT----WLLLSVFSTTGESQAEKTKEMDEHPYEEADEQESSPLGINHTEVPGAKANQFDWALLA 417
Fly 418 TAVDRISFVSFSLAFLILAIR-CSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 104/453 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 53/218 (24%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 43/210 (20%) | ||
HTR3B | NP_006019.1 | LIC | 8..435 | CDD:273305 | 109/473 (23%) |
Neur_chan_LBD | 33..239 | CDD:280998 | 54/219 (25%) | ||
Neur_chan_memb | 246..>328 | CDD:280999 | 18/82 (22%) | ||
HA-stretch | 381..413 | 9/61 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |