Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_071525.1 | Gene: | Htr3b / 58963 | RGDID: | 61820 | Length: | 437 | Species: | Rattus norvegicus |
Alignment Length: | 461 | Identity: | 107/461 - (23%) |
---|---|---|---|
Similarity: | 189/461 - (40%) | Gaps: | 74/461 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 MLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQ-GTPTNVSLEMVV-T 84
Fly 85 YIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAET 149
Fly 150 Q-------VTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGLKVVLPENGTARG- 206
Fly 207 ESLDHD--DLVQSPEWEI--VDSRAHF--VSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVIL 265
Fly 266 ALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYST--SLLYLSVSTI 328
Fly 329 VEVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKEMDEHPYEEADEQES 393
Fly 394 SPLGINHTEVPGAKANQF----------------------DWALLATAVDRISF-VSFSLAFLIL 435
Fly 436 AIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 100/438 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 54/210 (26%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 38/203 (19%) | ||
Htr3b | NP_071525.1 | LIC | 30..431 | CDD:273305 | 97/430 (23%) |
Neur_chan_LBD | 30..233 | CDD:280998 | 54/208 (26%) | ||
Neur_chan_memb | 242..>313 | CDD:280999 | 15/71 (21%) | ||
HA-stretch | 377..409 | 2/31 (6%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |