Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_697298.4 | Gene: | chrna2b / 568849 | ZFINID: | ZDB-GENE-041001-99 | Length: | 550 | Species: | Danio rerio |
Alignment Length: | 430 | Identity: | 116/430 - (26%) |
---|---|---|---|
Similarity: | 192/430 - (44%) | Gaps: | 74/430 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 ALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVTY-------IDIDELNGKLTTHCWLNLRWRD 107
Fly 108 EERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQVT---LSHDGHFRWMPPAVYTA 169
Fly 170 YCELNMLNWPHDKQSCKLKIGSW---GLKVVLP--ENGTARGESLDHDDLVQSPEWEIVDSRAHF 229
Fly 230 VSQDY------YGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMINGLLI 288
Fly 289 IVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL---YLATGKHKRRLPEALR 350
Fly 351 KLLHGHLGTWLLLSVFSTTGESQAEKTKEMDEHPYEEADEQESSPLGINHTEVPGAKANQFDWAL 415
Fly 416 LATAVD--------------RISFVSFSLAFLILAIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 113/424 (27%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 71/215 (33%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 37/195 (19%) | ||
chrna2b | XP_697298.4 | LIC | 6..543 | CDD:273305 | 116/430 (27%) |
Neur_chan_LBD | 35..241 | CDD:280998 | 72/217 (33%) | ||
Neur_chan_memb | 248..541 | CDD:280999 | 41/204 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |