Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524406.1 | Gene: | ort / 45910 | FlyBaseID: | FBgn0003011 | Length: | 485 | Species: | Drosophila melanogaster |
Alignment Length: | 311 | Identity: | 68/311 - (21%) |
---|---|---|---|
Similarity: | 115/311 - (36%) | Gaps: | 74/311 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 YDSDVQPVFQGTPTNVSLEMVVTYID-IDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQ--- 122
Fly 123 ----ITLKSSEVWTPQITLFNGDEGGLMAETQVTLSHDGHFRWMPPAVYTAY---------CELN 174
Fly 175 MLNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDH--DDL---------------VQSPEWEI 222
Fly 223 VDSRAHFVSQDY----YGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMI 283
Fly 284 NGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL 334 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 68/311 (22%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 50/222 (23%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 15/80 (19%) | ||
ort | NP_524406.1 | LIC | 31..481 | CDD:273305 | 68/311 (22%) |
Neur_chan_LBD | 38..235 | CDD:280998 | 50/222 (23%) | ||
Neur_chan_memb | 243..>334 | CDD:280999 | 15/80 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |