Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524483.1 | Gene: | nAChRbeta2 / 42920 | FlyBaseID: | FBgn0004118 | Length: | 519 | Species: | Drosophila melanogaster |
Alignment Length: | 484 | Identity: | 125/484 - (25%) |
---|---|---|---|
Similarity: | 216/484 - (44%) | Gaps: | 79/484 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LLMGLTSVPGATATAD---PKNANVKALDRLHAGLFTNYDSDVQPVFQGTPT-NVSLEMVVT-YI 86
Fly 87 DIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGG----LMA 147
Fly 148 ETQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSW---GLKVVLPENGTARGESL 209
Fly 210 -----DHDDLVQSPEWEIVDSRAHFVSQDYY-------GYMEYTLTAQRRSSMYTAVIYTPASCI 262
Fly 263 VILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLV--VIFYSTSLLYLSV 325
Fly 326 STIVEVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLL------------SVFSTTGESQAEKTK 378
Fly 379 EMDEHPYEEADEQESS---------------PLGINHTEVPGAKANQF----------------D 412
Fly 413 WALLATAVDRISFVSFSLA--FLILAIRC 439 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 117/468 (25%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 67/215 (31%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 42/225 (19%) | ||
nAChRbeta2 | NP_524483.1 | LIC | 9..479 | CDD:273305 | 120/477 (25%) |
LGIC_ECD_nAChR_proto_alpha-like | 29..247 | CDD:349832 | 69/223 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447341 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |