Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
Alignment Length: | 538 | Identity: | 124/538 - (23%) |
---|---|---|---|
Similarity: | 215/538 - (39%) | Gaps: | 133/538 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 MGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEM---VVTY 85
Fly 86 IDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGG--LMAE 148
Fly 149 TQVTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSW---GLKVVLPE-NGTARGES- 208
Fly 209 ---LDHDDLVQSPEWEIV------DSRAHFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVI 264
Fly 265 LALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIV 329
Fly 330 EVLVL---YLATGKHK-----RRL------------------------PEALRKLLH-------- 354
Fly 355 ---------GHLGTWLLLSV----FSTTGESQAEKTKE---MDEHPYEEADEQESSPLGINHTEV 403
Fly 404 PGA----------------------------KANQF----------------DWALLATAVDRIS 424
Fly 425 FVSFSLAFL-ILAIRCSV 441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 117/517 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 59/213 (28%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 50/279 (18%) | ||
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 61/218 (28%) |
LIC | 27..530 | CDD:273305 | 117/509 (23%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 55/288 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447345 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |