Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 513 | Identity: | 120/513 - (23%) |
---|---|---|---|
Similarity: | 213/513 - (41%) | Gaps: | 126/513 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 VPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPT-NVSLEMVVT-YIDIDELNGKLT 96
Fly 97 THCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGG--LMAETQVTLSHDGHF 159
Fly 160 RWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSW---GLKVVLPENGTARGES-----LDHDDLVQ 216
Fly 217 SPEWEIVDSRAHFVSQDYY-----GYMEYT--LTAQRRSSMYTAVIYTPASCIVILALSAFWLPP 274
Fly 275 HMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL---YL 336
Fly 337 ATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKEMDEH----PYEEA--------- 388
Fly 389 ---------------------------------------DE------QESSPLGI---------- 398
Fly 399 --------------------NHTEV--PGAKANQFDWALLATAVDRISFVSFSLAFLI 434 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 117/508 (23%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 62/213 (29%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 49/271 (18%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 120/513 (23%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 64/218 (29%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 49/273 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447325 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |