Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996947.1 | Gene: | chrnd / 404273 | ZFINID: | ZDB-GENE-030131-6665 | Length: | 518 | Species: | Danio rerio |
Alignment Length: | 470 | Identity: | 112/470 - (23%) |
---|---|---|---|
Similarity: | 187/470 - (39%) | Gaps: | 116/470 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 DRLHAGLF--TNYDSDVQPVFQGTPTNVSLEMVVT---YIDIDELNGKLTTHCWLNLRWRDEERV 111
Fly 112 WQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQVT------LSHDGHFRWMPPAVYTAY 170
Fly 171 CELNMLNWPHDKQSCKLKIGSW-------GLKVVLPENGTARGE----SLDHDDLVQSPEWEIV- 223
Fly 224 -------------DSRAHFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPH 275
Fly 276 MGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVLYLATGK 340
Fly 341 H-------------KRRLPEALRKLLH----------------------GHLGTWLLLSVFSTTG 370
Fly 371 ESQAEKTKEMDEH----------PYEEADEQESSPLGINHTE--VPGAK--------ANQF---- 411
Fly 412 -DWALLATAVDRISF 425 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 112/470 (24%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 60/230 (26%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 50/231 (22%) | ||
chrnd | NP_996947.1 | LIC | 6..493 | CDD:273305 | 112/470 (24%) |
Neur_chan_LBD | 25..245 | CDD:280998 | 61/231 (26%) | ||
Neur_chan_memb | 252..490 | CDD:280999 | 50/231 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |