Sequence 1: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524131.1 | Gene: | Grd / 39984 | FlyBaseID: | FBgn0001134 | Length: | 686 | Species: | Drosophila melanogaster |
Alignment Length: | 470 | Identity: | 96/470 - (20%) |
---|---|---|---|
Similarity: | 169/470 - (35%) | Gaps: | 114/470 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 MGMLLMGLTSVPGATATADPKNANV-KALDRLHAGLFTNYDSDVQPVFQGTPTNVSLEMVVTYI- 86
Fly 87 DIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQ- 150
Fly 151 ---VTLSHDGHFRWMPPAVYTAYCELNMLNWPHDKQSCKLKIGSWGL---KVVL------PENGT 203
Fly 204 ARGESLDHDDLVQSPEWEIVD----------SRAHFVSQD------------------------- 233
Fly 234 -------------------------------------YYGYMEYTLTAQRRSSMYTAVIYTPASC 261
Fly 262 IVILALSAFWLPPHMGGEKIMINGLLIIVIAAFLMYFAQL-LPVLSNNTPL-VVIFYSTSLLYLS 324
Fly 325 VSTIVEVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGESQAEKTKEMDEHPYEEAD 389
Fly 390 EQESSPLGINHTEVP 404 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 91/455 (20%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 51/280 (18%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 35/152 (23%) | ||
Grd | NP_524131.1 | Neur_chan_LBD | 110..326 | CDD:280998 | 50/220 (23%) |
LIC | 111..670 | CDD:273305 | 88/444 (20%) | ||
Neur_chan_memb | 398..667 | CDD:280999 | 35/152 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447344 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |